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Supplementary material 4 from: Theissinger K, Kästel A, Elbrecht V, Makkonen J, Michiels S, Schmidt S, Allgeier S, Leese F, Brühl C (2018) Using DNA metabarcoding for assessing chironomid diversity and community change in mosquito controlled temporary wetlands. Metabarcoding and Metagenomics 2: e21060. https://doi.org/10.3897/mbmg.2.21060

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Date
2018-02-06
Author
Theissinger, Kathrin,University of Koblenz-Landau, Institute for Environmental Sciences, Landau, Germany
Kästel, Anna,University of Koblenz-Landau, Institute for Environmental Sciences, Landau, Germany
Elbrecht, Vasco,University of Duisburg-Essen, Aquatic Ecosystem Research, Essen, Germany
Makkonen, Jenny,University of Koblenz-Landau, Institute for Environmental Sciences, Landau, Germany|University of Eastern Finland, Department of Environmental and Biological Sciences, Kuopio, Finland
Michiels, Susanne,AquaDiptera, Emmendingen, Germany
Schmidt, Susanne,University of Koblenz-Landau, Institute for Environmental Sciences, Landau, Germany
Allgeier, Stefanie,University of Koblenz-Landau, Institute for Environmental Sciences, Landau, Germany
Leese, Florian,University of Duisburg-Essen, Aquatic Ecosystem Research, Essen, Germany
Brühl, Carsten,University of Koblenz-Landau, Institute for Environmental Sciences, Landau, Germany
Unique identifier
10.3897/mbmg.2.21060.suppl4
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Theissinger, Kathrin,University of Koblenz-Landau, Institute for Environmental Sciences, Landau, Germany. Kästel, Anna,University of Koblenz-Landau, Institute for Environmental Sciences, Landau, Germany. Elbrecht, Vasco,University of Duisburg-Essen, Aquatic Ecosystem Research, Essen, Germany. Makkonen, Jenny,University of Koblenz-Landau, Institute for Environmental Sciences, Landau, Germany|University of Eastern Finland, Department of Environmental and Biological Sciences, Kuopio, Finland. Michiels, Susanne,AquaDiptera, Emmendingen, Germany. Schmidt, Susanne,University of Koblenz-Landau, Institute for Environmental Sciences, Landau, Germany. Allgeier, Stefanie,University of Koblenz-Landau, Institute for Environmental Sciences, Landau, Germany. Leese, Florian,University of Duisburg-Essen, Aquatic Ecosystem Research, Essen, Germany. Brühl, Carsten,University of Koblenz-Landau, Institute for Environmental Sciences, Landau, Germany. , Supplementary material 4 from: Theissinger K, Kästel A, Elbrecht V, Makkonen J, Michiels S, Schmidt S, Allgeier S, Leese F, Brühl C (2018) Using DNA metabarcoding for assessing chironomid diversity and community change in mosquito controlled temporary wetlands. Metabarcoding and Metagenomics 2: e21060. https://doi.org/10.3897/mbmg.2.21060, 2018, 10.3897/mbmg.2.21060.suppl4.
Abstract

OTU ID, taxonomy of identified species, BOLD Bin, sequence abundancies per site an time and OTU sequences

Subjects
Bacillus thuringensis var. israelensis (Bti)   Barcode of Life Database (BOLD)   chironomid saprobic index   cytochrome oxidase subunit I (COI)   ecotoxicology   macrozoobenthos emergence   operational taxonomic units (OTU)   
URI
https://erepo.uef.fi/handle/123456789/6381
Link to the original item
https://zenodo.org/record/1167470
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  • Supplementary material 16 from: de Jong Y, Kouwenberg J, Boumans L, Hussey C, Hyam R, Nicolson N, Kirk P, Paton A, Michel E, Guiry M, Boegh P, Pedersen H, Enghoff H, von Raab-Straube E, Güntsch A, Geoffroy M, Müller A, Kohlbecker A, Berendsohn W, Appeltans W, Arvanitidis C, Vanhoorne B, Declerck J, Vandepitte L, Hernandez F, Nash R, Costello M, Ouvrard D, Bezard-Falgas P, Bourgoin T, Wetzel F, Glöckler F, Korb G, Ring C, Hagedorn G, Häuser C, Aktaç N, Asan A, Ardelean A, Borges P, Dhora D, Khachatryan H, Malicky M, Ibrahimov S, Tuzikov A, De Wever A, Moncheva S, Spassov N, Chobot K, Popov A, Boršić I, Sfenthourakis S, Kõljalg U, Uotila P, Olivier G, Dauvin J, Tarkhnishvili D, Chaladze G, Tuerkay M, Legakis A, Peregovits L, Gudmundsson G, Ólafsson E, Lysaght L, Galil B, Raimondo F, Domina G, Stoch F, Minelli A, Spungis V, Budrys E, Olenin S, Turpel A, Walisch T, Krpach V, Gambin M, Ungureanu L, Karaman G, Kleukers R, Stur E, Aagaard K, Valland N, Moen T, Bogdanowicz W, Tykarski P, Węsławski J, Kędra M, M. de Frias Martins A, Abreu A, Silva R, Medvedev S, Ryss A, Šimić S, Marhold K, Stloukal E, Tome D, Ramos M, Valdés B, Pina F, Kullander S, Telenius A, Gonseth Y, Tschudin P, Sergeyeva O, Vladymyrov V, Rizun V, Raper C, Lear D, Stoev P, Penev L, Rubio A, Backeljau T, Saarenmaa H, Ulenberg S (2015) PESI - a taxonomic backbone for Europe. Biodiversity Data Journal 3: e5848. https://doi.org/10.3897/BDJ.3.e5848 

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von Raab-Straube, Eckhard,Botanic Garden and Botanical Museum Berlin-Dahlem, Freie Universität Berlin, Berlin, Germany; Güntsch, Anton,Botanic Garden and Botanical Museum Berlin-Dahlem, Freie Universität Berlin, Berlin, Germany; Geoffroy, Marc,Botanic Garden and Botanical Museum Berlin-Dahlem, Freie Universität Berlin, Berlin, Germany; Müller, Andreas,Botanic Garden and Botanical Museum Berlin-Dahlem, Freie Universität Berlin, Berlin, Germany; Kohlbecker, Andreas,Botanic Garden and Botanical Museum Berlin-Dahlem, Freie Universität Berlin, Berlin, Germany; Berendsohn, Walter,Botanic Garden and Botanical Museum Berlin-Dahlem, Freie Universität Berlin, Berlin, Germany; Appeltans, Ward,OBIS, Oostende, Belgium; Arvanitidis, Christos,Hellenic Centre for Marine Research, Heraklion, Greece; Vanhoorne, Bart,Flanders Marine Institute (VLIZ), Oostende, Belgium; Declerck, Joram,Flanders Marine Institute (VLIZ), Oostende, Belgium; Vandepitte, Leen,Flanders Marine Institute (VLIZ), Oostende, Belgium; Hernandez, Francisco,Flanders Marine Institute (VLIZ), Oostende, Belgium; Nash, Róisín,Marine and Freshwater Research Centre (MFRC), Galway Mayo Institute of Technology (GMIT), Galway, Ireland; Costello, Mark,University of Auckland, Auckland, New Zealand; Ouvrard, David,Natural History Museum, London, United Kingdom; Bezard-Falgas, Pascale,Muséum national d'Histoire naturelle, Paris, France; Bourgoin, Thierry,Muséum national d'Histoire naturelle, Département Systématique & Evolution, UMR 7205 MNHN-CNRS-UPMC-EPHE, (ISyEB), Paris, France; Wetzel, Florian,Museum für Naturkunde, Leibniz Institute for Evolution and Biodiversity Science, Berlin, Germany; Glöckler, Falko,Museum für Naturkunde, Leibniz Institute for Evolution and Biodiversity Science, Berlin, Germany; Korb, Günther,Museum für Naturkunde, Leibniz Institute for Evolution and Biodiversity Science, Berlin, Germany; Ring, Caroline,Museum für Naturkunde, Leibniz Institute for Evolution and Biodiversity Science, Berlin, Germany; Hagedorn, Gregor,Museum für Naturkunde, Leibniz Institute for Evolution and Biodiversity Science, Berlin, Germany; Häuser, Christoph,Museum für Naturkunde, Leibniz Institute for Evolution and Biodiversity Science, Berlin, Germany; Aktaç, Nihat,Trakya University, Edirne, Turkey; Asan, Ahmet,Trakya University, Edirne, Turkey; Ardelean, Adorian,myNature Association, Timișoara, Romania; Borges, Paulo,CE3C – Centre for Ecology, Evolution and Environmental Changes / Azorean Biodiversity Group and Universidade dos Açores, Angra do Heroísmo, Azores, Portugal; Dhora, Dhimiter,University of Shkodra, Faculty of Natural Sciences, Shkodra, Albania; Khachatryan, Hasmik,National Academy of Sciences of Armenia, Institute of Zoology, Yerevan, Armenia; Malicky, Michael,Oberösterreichisches Landesmuseum, Biologiezentrum, Linz, Austria; Ibrahimov, Shaig,Institute of Zoology, Baku, Azerbaijan; Tuzikov, Alexander,United Institute of Informatics Problems, National Academy of Sciences of Belarus, Minsk, Belarus; De Wever, Aaike,Royal Belgian Institute of Natural Sciences, Brussels, Belgium; Moncheva, Snejana,Institute of Oceanology, Varna, Bulgaria; Spassov, Nikolai,National Museum of Natural History, Sofia, Bulgaria; Chobot, Karel,Nature Conservation Agency of the Czech Republic, Prague, Czech Republic; Popov, Alexi,National Museum of Natural History, Sofia, Bulgaria; Boršić, Igor,State Institute for Nature Protection, Zagreb, Croatia; Sfenthourakis, Spyros,University of Cyprus, Nicosia, Cyprus; Kõljalg, Urmas,University of Tartu, Tartu, Estonia; Uotila, Pertti,University of Helsinki, Helsinki, Finland; Olivier, Gargominy,Muséum national d'Histoire naturelle, Paris, France; Dauvin, Jean-Claude,University of Sciences and Technology of Lille, Lille, France; Tarkhnishvili, David,Ilia Chavchavadze State University, Tbilisi, Georgia; Chaladze, Giorgi,Ilia Chavchavadze State University, Tbilisi, Georgia; Tuerkay, Michael,Senckenberg Museum, Frankfurt, Germany; Legakis, Anastasios,National and Kapodistrian University of Athens, Athens, Greece; Peregovits, László,Hungarian Natural History Museum, Budapest, Hungary; Gudmundsson, Gudmundur,Icelandic Institute of Natural History, Reykjavik, Iceland; Ólafsson, Erling,Icelandic Institute of Natural History, Reykjavik, Iceland; Lysaght, Liam,National Biodiversity Data Center, Waterford, Ireland; Galil, Bella,National Institute of Oceanography, Israel Oceanographic and Limnological Research, Haifa, Israel; Raimondo, Francesco,University Palermo, Botanical Garden and Herbarium Mediterraneum, Palermo, Italy; Domina, Gianniantonio,University Palermo, Botanical Garden and Herbarium Mediterraneum, Palermo, Italy; Stoch, Fabio,University of L'Aquila, L'Aquila, Italy; Minelli, Alessandro,University of Padova, Padova, Italy; Spungis, Voldermars,University of Latvia, Riga, Latvia; Budrys, Eduardas,Nature Research Centre, Vilnius, Lithuania; Olenin, Sergej,Klaipeda University, Klaipeda, Lithuania; Turpel, Armand,Musée national d'histoire naturelle Luxembourg, Luxembourg, Luxembourg; Walisch, Tania,Musée national d'histoire naturelle Luxembourg, Luxembourg, Luxembourg; Krpach, Vladimir,Macedonian Museum of Natural History, Skopje, Macedonia; Gambin, Marie,Malta Environment & Planning Authority, Floriana, Malta; Ungureanu, Laurentia,Institute of Zoology of the Academy of Sciences of Moldova, Chişinău, Moldova; Karaman, Gordan,Montenegrin Academy of Sciences and Arts, Podgorica, Montenegro; Kleukers, Roy,Naturalis Biodiversity Center, Leiden, Netherlands; Stur, Elisabeth,NTNU University Museum, Norwegian University of Science and Technology, Trondheim, Norway; Aagaard, Kaare,NTNU University Museum, Norwegian University of Science and Technology, Trondheim, Norway; Valland, Nils,Norwegian Biodiversity Information Centre (Artsdatabanken), Trondheim, Norway; Moen, Toril,Norwegian Biodiversity Information Centre (Artsdatabanken), Trondheim, Norway; Bogdanowicz, Wieslaw,Museum and Institute of Zoology, Polish Academy of Sciences, Warsaw, Poland; Tykarski, Piotr,University of Warsaw, Faculty of Biology, Dept. of Ecology, Biological and Chemical Research Centre, Warsaw, Poland; Węsławski, Jan,Institute of Oceanology of Polish Academy of Sciences, Sopot, Poland; Kędra, Monika,Institute of Oceanology of Polish Academy of Sciences, Sopot, Poland; M. de Frias Martins, Antonio,University of the Azores, Ponta Delgada, Portugal; Abreu, António,Estação de Biologia Marinha do Funchal, Madeira, Portugal; Silva, Ricardo,Naturdata, Lisboa, Portugal; Medvedev, Sergei,Zoological Institute of Russian Academy of Sciences, St Petersburg, Russia; Ryss, Alexander,Zoological Institute of Russian Academy of Sciences, St Petersburg, Russia; Šimić, Smiljka,Centre for the Balkan Biodiversity Conservation, Novi Sad, Serbia; Marhold, Karol,Institute of Botany, Slovak Academy of Sciences, Bratislava, Slovakia; Stloukal, Eduard,Comenius University, Bratislava, Slovakia; Tome, Davorin,Slovenian National Institute of Biology, Ljubljana, Slovenia; Ramos, Marian,Museo Nacional de Ciencias Naturales (CSIC), Madrid, Spain; Valdés, Benito,University of Seville, Seville, Spain; Pina, Francisco,University of Seville, Seville, Spain; Kullander, Sven,Swedish Museum of Natural History, Stockholm, Sweden; Telenius, Anders,Swedish Museum of Natural History, Stockholm, Sweden; Gonseth, Yves,Centre Suisse de Cartographie de la Faune, Neuchâtel, Switzerland; Tschudin, Pascal,Centre Suisse de Cartographie de la Faune, Neuchâtel, Switzerland; Sergeyeva, Oleksandra,Institute of Biology of the Southern Seas, Sevastopol, Ukraine; Vladymyrov, Volodymyr,Institute of Biology of the Southern Seas, Sevastopol, Ukraine; Rizun, Volodymyr,State Museum of Natural History, National Academy of Sciences of Ukraine, Lviv, Ukraine; Raper, Chris,Natural History Museum, London, United Kingdom; Lear, Dan,Marine Biological Association of the United Kingdom, Plymouth, United Kingdom; Stoev, Pavel,National Museum of Natural History, Sofia, Bulgaria; Penev, Lyubomir,Pensoft Publishers, Sofia, Bulgaria; Rubio, Ana,CETAF c/o Royal Belgian Institute of Natural Sciences, Brussels, Belgium; Backeljau, Thierry,Royal Belgian Institute of Natural Sciences, Brussels, Belgium; Saarenmaa, Hannu,University of Eastern Finland, Joensuu, Finland; Ulenberg, Sandrine,Naturalis Biodiversity Center, Leiden, Netherlands (2017-09-21)
    PESI workshop on linking taxonomic databases with online science journals
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